Characterization of the yeast biodiversity from Oslo and Kveik beer

FungiMiner is an educational project developed in the FunGIA Lab (Oslo Mycology Group) since 2022 and supported by the University of Oslo:Life Science.

Biotech_yeasts

Biotechnological applications of yeasts.

The scientific aims of the project are:

1. The characterization of yeasts isolated from wild environments close to Oslo.

2. The phenotypic characterization of yeast isolated from Kveik beer fermentations.

The educational aims of the project are:

1. Learn the microbial methods to isolate pure cultures of wild/industrial yeasts and the molecular and bioinformatic tools to identify them.

2. Learn the methods to phenotype yeasts.

3. Learn to valorize the potential biotechnological application of the isolated yeasts.

Background

-Wild yeasts for industrial challenges

In the early times of civilization, yeasts had been the answer to fulfill human necessities by performing multiple industrial processes (Figure 1): i) animal/human feed; ii) biofertilizers; iii) pharmaceutical; iv) biosensor; v) biofactories; vi) bioremediation; vi) biological control; vii) fermented food (bread, sausages, dairy products, sourdough, soy souce) and alcoholic beverages; viii) cosmetics.

Despite the high number of known yeast species, estimates suggest that around 99% of yeast species are still unknown. Hence, there may exist around 150 thousand yeasts species on earth. One-third of the described yeast species are based on a single strain, or they were isolated from industrial environments.

-Kveik yeasts, a Norwegian treasure

One of the most successful yeasts in the industry has been Saccharomyces cerevisiae, also known as the baker yeast. S. cerevisiae has been domesticated from wild environments for the production of wine, sake, traditional beverages, among other alcoholic beverages. The fermentative power of S. cerevisiae is applied to convert single or complex sugars to valuable compounds, such as bioethanol, trying to substitute fossil fuels. One of the areas where this yeast has been more successful is beer fermentation. There are different groups of brewing yeast depending of the type of beer being produced. Four years ago, a great discovery was unraveled. In farmhouses of Norway, a traditional fermented beer is conducted by a new lineage of S. cerevisiae, which was called Kveik (the norwegian designation for yeasts). This beer is arising as a national treasure and you might find different styles in Vinmonopolet. The most interesting is that this new yeast has phenotypic singularities that is attracting the industry.

-Societal challenge

As climatic change and human population growth continue the food industry, the sustainability of processes and lifestyle are under threat. In addition, well-established fermentative processes are seeing how their industrial yeasts are not useful anymore because they cannot tolerate the new properties of raw material (wheat, grapes, etc), modified by the effects of global warming. To find new solutions, we need new yeasts with new phenotypic properties. This project is a good opportunity to start to isolate new yeasts species, characterize the yeast biodiversity close to Oslo, as well as from Kveik fermentations. And maybe find the new industrial yeasts for generating a circular bioeconomy and sustainable food systems

Outcomes

2022: 
#. 36 processed samples from 2 Oslo sites (Maridalsvannet + Bygdøy).
#. Identified species: 58 Ascomycota + 19 Basidiomycota + 14 Mucoromycota.
#. 68.4% of the species not reported in Norway at the GlobalFungi DB.

Financing

UiO:Life Sciences

UiOLifeSciences

 

 

 

 

 

References

#. Cafarchia C, Camarda A, Romito D, Campolo M, Quaglia NC, Tullio D, Otranto D. 2006. Occurrence of yeasts in cloacae of migratory birds. Mycopathologia. 161:229-234.
#. Charron G, Leducq JB, Bertin C, Dubé AK, Landry CR. 2013. Exploring the northern limit of the distribution of Saccharomyces cerevisiae and Saccharomyces paradoxus in North America. FEMS Yeast Res. 14:281-288.
#. Francesca N, Canale DE, Settanni L, Moschetti G. 2012. Dissemination of wine-related yeasts by migratory birds. Environ Microbiol Rep. 4:105-112.
#. Francesca N, Carvalho C, Almeida PM, Sannino C, Settanni L, Sampaio JP, Moschetti G. 2013. Wickerhamomyces sylviae f.a., sp. nov., an ascomycetous yeast species isolated from migratory birds. Int J Syst Evol Microbiol. 63:4824-4830.
#. Francesca N, Carvalho C, Sannino C, Guerreiro MA, Almeida PM, Settanni L, Massa B, Sampaio JP, Moschetti G. 2014. Yeasts vectored by migratory birds collected in the Mediterranean island of Ustica and description of Phaffomyces usticensis f.a. sp. nov., a new species related to the cactus ecoclade. FEMS Yeast Res. 14:910-921.
#. Francesca N, Chiurazzi M, Romano R, Aponte M, Settanni L, Moschetti G. 2010. Indigenous yeast communities in the environment of "Rovello bianco" grape variety and their use in commercial white wine fermentation. World J Microbiol Biotechnol. 26:337-351.
#. Gerke JP, Chen CTL, Cohen BA. 2006. Natural isolates of Saccharomyces cerevisiae display complex genetic variation in sporulation efficiency. Genetics. 174:985
#. Lopes CA, Barrio E, Querol A. 2010. Natural hybrids of S. cerevisiae x S. kudriavzevii share alleles with European wild populations of Saccharomyces kudriavzevii. FEMS Yeast Res. 10:412-421.
Mozzachiodi S, et al.: Yeasts from temperate forests. Yeast 2022, 39:4-24.
#. Peris D, Sylvester K, Libkind D, Gonçalves P, Sampaio JP, Alexander WG, Hittinger CT. 2014. Population structure and reticulate evolution of Saccharomyces eubayanus and its lager-brewing hybrids. Mol Ecol. 23:2031-2045.
#. Sampaio JP, Gonçalves P. 2008. Natural populations of Saccharomyces kudriavzevii in Portugal are associated with oak bark and are sympatric with S. cerevisiae and S. paradoxus. Appl Environ Microbiol. 74:2144-2152.
#. Spurley, W. J., et al., "Substrate, temperature, and geographical patterns among nearly 2000 natural yeast isolates," Yeast 39, 55-68 (2021).
#. Stefanini I, Dapporto L, Berná L, Polsinelli M, Turillazzi S, Cavalieri D. 2016. Social wasps are a Saccharomyces mating nest. Proc Natl Acad Sci U S A 113, 2247-2251.
#. Sylvester, K., et al., "Temperature and host preferences drive the diversification of Saccharomyces and other yeasts: a survey and the discovery of eight new yeast species," FEMS Yeast Res. 15, 1-16 (2015).

Published Sep. 5, 2022 10:55 AM - Last modified Sep. 28, 2022 5:47 AM

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